Improving Drug Sensitivity Prediction and Inference by Multitask Learning biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Standardized Nomenclature and Reporting for PacBio HiFi Sequencing and Analysis of rAAV Gene Therapy Vectors biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Predicting transcriptional activation domain function using Graph Neural Networks biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

DeepES: Deep learning-based enzyme screening to identify orphan enzyme genes biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

The Continuous Language of Protein Structure biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

CELLama: Foundation Model for Single Cell and Spatial Transcriptomics by Cell Embedding Leveraging Language Model Abilities biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

wgbstools: A computational suite for DNA methylation sequencing data representation, visualization, and analysis biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Phasing millions of samples achieves near perfect accuracy, enabling parent-of-origin classification of variants biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Predictive Immunoinformatics Reveal Promising Safety and Anti-Onchocerciasis Protective Immune Response Profiles to Vaccine ... biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Repeat and haplotype aware error correction in nanopore sequencing reads with DeChat biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

scDAPP: a comprehensive single-cell transcriptomics analysis pipeline optimized for cross-group comparison biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Conditional language models enable the efficient design of proficient enzymes biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Simultaneous Prediction of Functional States and Types of cis-regulatory Modules Reveals Their Prevalent Dual Uses as Enhancers and ... biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Disentangling associations between complex traits and cell types with seismic biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

A deep learning-based model integrating base-pairing patterns improves microRNA target site prediction biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Enhancing Biosecurity with Watermarked Protein Design biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Draft genome analysis of Delftia tsuruhatensis IICT-RSP4, a strain with uricase potential isolated from soil biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Highly Effective Batch Effect Correction Method for RNA-seq Count Data biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Prediction of antibiotic resistance mechanisms using a protein language model biorxiv.org/cgi/content/sh… #biorxiv_bioinfo